mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AACCCGTAGATCCGATCTTGT AAGCTCGCTTCTATGGGTCTG AATTGGCATAAACCCGTAGATCCGATCTTGTGTTGAAACGCACTGCACAAGCTCGCTTCTATGGGTCTGTG 4 0 5' arm Taeniopygia_guttata mirbase mir-10 2e-29 tgu-mir-99-2 7e-35 -29.4 ......((((.(((((((((..(((.(((((((...........))))))).)))..))))))))).)))) (-29.40)