mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GTACAGTACTGTGATAACTGAA CAGTTATCACAGTGCTGATGCTG TGGCTCAGTTATCACAGTGCTGATGCTGTCTCTTGTAAAGGTACAGTACTGTGATAACTGAAGGATGGCAGC 1 1 3' arm Taeniopygia_guttata mirbase mir-101 5e-33 gga-mir-101-2 1e-33 -31.8 ....((((((((((((((((((.((((..(....)....))))))))))))))))))))))........... (-31.80)