mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTCCCTTTGTCATCCTATGCCT GCAGGGACAGCAAAGGGATGC ACCTGTGGGCTTCCCTTTGTCATCCTATGCCTGGAGATCACAGTGAGGCAGGGACAGCAAAGGGATGCTCAG 3 1 5' arm Taeniopygia_guttata mirbase mir-204 3e-34 gga-mir-204-2 2e-35 -33.7 .....(((((.(((((((((..((((.(((((.(.........).)))))))))..))))))))).))))). (-33.70)