mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCTTTGGTTATCTAGCTGTATGA ATAAAGCTAGATAACCGAAAGT TCTTTGGTTATCTAGCTGTATGAGTGCCACAGAGCCGTCATAAAGCTAGATAACCGAAAGT 3 0 5' arm Canis_familiaris mirbase mir-9 1e-27 hsa-mir-9-3 5e-29 -28.4 ..(((((((((((((((.(((((..((......))..))))).)))))))))))))))... (-28.40)