mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GGCCGGGGGACGGACTGGGAA CCCAGTCCCGAACCCGTCGG TGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGGACTGCTCGAGCTGCTCCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGGTTCCTTCGGGGGCC AGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGGGTCGGGGGAACCCCGACAGATAGCGCGTTTCGCGCGTACTCCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGCGGTCGACGGCAACGTTAGGAAGTCCGGAGACGTCGGCGGGAGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAATCGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCTCCCGGCGGCCCTTGAAAATCCGGAGGACCGAATGCCGTCCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGGACTGCTCGAGCTGCTCCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGGTTCCTTCGGGGGCCTT 5 1 3' arm Solanum_torvum mirnest 100 peu-MIR2911 1e-41 -69.3 ......(((....)))...(((((((((....(((((((((((.((((((.((((((..(((((....)))))..)))))).)))))))).))))).))))....)))))))))..((((((....)))))) (-69.3)