mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CCGGATCCGAGTTCGGGTTCC AACCCGAATCTGATTAGCT TAGACCAATGGGGAACCCGAATCTGATTAGCTCCTTGTGTGCCCTCGATGGTGCCGGATCCGAGTTCGGGTTCCCGTTCGGGTC GCAAAAAAGGAAACAACTTTATTAGAATCAAACAAAATAGATTAAAAAAAAAATAATACCTCAGGAAGAGAAATGCTTTTTCCCTTCACAATCAGGACTTTCATTGAAATTCTTAAAAGGGTATTTAGCAGTAACCATTCCAACCTCAAAAACCAAATTCTCACCACTAGATCTGATTCCTGTTATACCCCACCACTTAAAAAAAGCCCTCACACTAATCCCATCAAGCTCCGCAATACGATTCTCAACAATTTTACCTCTAATTTTCTTCGAATACGTCGCAAGGTAGTTGTCCGGAGGAAGAGTGATTTTACACTTTTCACGCAGAGAAACCAGAAACTCGCCGGAACTGGAATTTAGAGAATACCCATTAACGTTTTTGGGAAGTAGACCAATGGGGAACCCGAATCTGATTAGCTCCTTGTGTGCCCTCGATGGTGCCGGATCCGAGTTCGGGTTCCCGTTCGGGTCCGGGTTTGTAGAGGATACAGAGACGGCGAACATGAGAGGAATAATGGTGAAGATTACTAGGGTTCCTGCCATTTTTTCTTTGAGCTTCGCTAATGAAAAACTTTTTTCTGGGAA 2 2 3' arm Solanum_torvum mirnest 100 100 -30.8 ..((((....(((((((((((((.((((.((.((...((......))..)).))..)))).)).))))))))))).....)))) (-30.8)