mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GATTCACAGGCCCGATCTTCT AAGCAGTTGGACTTACGAATCTC TCATCGGTCTCGATTCACAGGCCCGATCTTCTTCTCGAAGCAGTTGGACTTACGAATCTCTCAAGAAT TCGTTCTCATCGGTCTCGATTCACAGGCCCGATCTTCTTCTCGAAGCAGTTGGACTTACGAATCTCTCAAGAATTTCCGTGAAATCTCTGCGGTCGTTCAGACTCATCTCAAACAGTGTTTACCTCTCACTATGTTGCGCTCTCATAGCATCTGCAGTCGGAGCATACTTTCACATCATATGGAACATCGGTGGCCTTCTAACCACCTTAGCAACATTGGGTTGCATGTTTTGGCTACTCGCCACTTCTCCACACGAAGAGCAAAAAAAGAGTTTCACTATTAATGGCGTCTTCCTTTCTCCAAGGAGCTTCCATTGGTCCCTTAATCGAGTTAGCCCTAGATTTTGACTCAAGCATTTTGGTGAGCGCATTTGTAGGGACTGGAATCGCGTTTGCTTGTTTCTCAGGGGCAGCCATGTTAGCAAAACGCAGAGAGTATCTTTATCTTGGAGGACTTCTTTCCTCTGGTGTTTCAATGCTTTTCTGGTTACATTTCGCTTCCTCTATTTTCGGTGGTTCTGTTGGCCTCTTCAAGATTGAGTTGTATCTTGGGCTGTTGGTGTTTGTTGGGTACATTGTGTACGACACCCAGGAGATTATCGAAAAGGCCCACCTTGGAGATTTGGACTATGTGAAACATGCTCTCATGCTTTTTACCGATATCATTGCCGTTTTTGTTCGCATTCTTATCATCATGTTGAAAA 4 2 5' arm Taraxacum_officinale mirnest 100 100 -12.2 ...........(((((..(((.(((((((((.....))))..))))).)))..))))).......... (-12.2)