mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GTGTTGAAACAATCTCTGCTG CTGGAGTTTGTTTCAATATTG TCATTCCTTCAGTGTTGAAACAATCTCTGCTGAACCAGGCTCCAAACTACGTTCACTGGAGTTTGTTTCAATATTGCAAGAATGA 3 0 5' arm Equus_caballus mirbase mir-653 7e-42 cfa-mir-653 1e-33 -32.5 ((((((...((((((((((((((.((((..(((((.((........))..)))))..)))).))))))))))))))...)))))) (-32.50)