mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ACTCCCTCCGTCCCAAAATGA ATTTTGGGACGGAGACCATTT TCCAGATTTTGTACTCCCTCCGTCCCAAAATGATTGCAATCATTTTGGGACGGAGACCATTTTGGGACGG TTTTTTTTTTTTTTTTTTTTTTTTCCATTAGGATTATCTAGTAAATATATTCCAGATTTTGTACTCCCTCCGTCCCAAAATGATTGCAATCATTTTGGGACGGAGACCATTTTGGGACGGATCCATCGGTAAAACTCAAAATTAACATCTTCACACATTCAATGACAATAATTATATGACAGGGGTAAACCGGTTCATGCTAAAATATACTATGTCTAAATTCTTCAGCAAAGCTGATACGACGGTCCGATAATCAGACTTAGTTCTAGACTCCTCACACACCTGTTTATCCCTAATCTTCAAAAACCGATCCATATATTCTACGGAATCCTCGTCATATTTATCGGCCAGAACATTCCTCAACCCCTCAAAATCACCAGGACCATCGGTCAAATATTCAAAACCTTCAACTTTATCTTTTCTTACGTCAAATCTACGCAATTTCTTCATTGTTTTATGTTCACGACAAATTGTACAAAGCGTCATACTCAGATCTATCTCACCCCAGTACCCGAATAAAATACTTAAAGCTCCCCTTATTCTATGATCACTGTCACCGTCAAGAATAGGGTCCAACAAGGGATCTATGTGTATACGTGTGACTCGTTCCACAATTCGTAAAAGTTGTGCTCTTTTTGAATATTTCTTTAGGATATTCAACAGATGTGATGACTCTTTTAGTGCCTTGATTAGCTGCACAACCATGAGTTGATCAAACCAAAACTCTTTTACAGCACGCCTATGTCTTACATGATACTCATAACGGTCCGTTCTTCCAATAGGAACAT 5 0 5' arm Triphysaria_pusilla mirnest MIR1122 0.00001 tae-MIR1137 0.0002 -29.5 ((((((...((......(((((((((((((((((....)))))))))))))))))..)).)))))).... (-29.5)