mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGAGATGAAGCACTGTAGCTC GGTGCAGTGCTGCATCTCTGG GCGCAGCGCCGTGTCTCCCAGCCTGAGGTGCAGTGCTGCATCTCTGGTCAGTTGGGAGTCTGAGATGAAGCACTGTAGCTCAGGAAGAGAGAAGTTGTTCTGCAGC 3 0 3' arm Macaca_mulatta mirbase mir-143 6e-43 lla-mir-143 4e-53 -51.9 ..((((.((....((((.(..((((((.(((((((((.((((((.((((......)).)).)))))).))))))))).))))))..).))))....)).))))... (-51.90)