mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GTGTGCGGAAGTGCTTCTGCT TGGAAACATTTCCGCACAAACTAGATTCTG TATAAATCTAGTGGAAACATTTCCGCACAAACTAGATTCTGGACACCAGTGTGCGGAAGTGCTTCTGCTGCATTTTTAGG 3 9 3' arm Macaca_mulatta mirbase mir-147 3e-16 hsa-mir-147b 5e-33 -30.4 ((.((((.(((..(((.((((((((((((.........((((...)))))))))))))))).)))..))).)))).)).. (-30.40)