mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CCCAGTGTTCAGACTACCTGTTC ACAGTAGTCTGCACATTGGTTA GCCAACCCAGTGTTCAGACTACCTGTTCAGGAGGCTCTCAACGTGTACAGTAGTCTGCACATTGGTTAGGC 3 1 5' arm Macaca_mulatta mirbase mir-199 1e-33 mml-mir-199a-2 7e-35 -29.2 (((...(((((((.((((((((.(((.((.(..(....)..).)).))))))))))).)))))))...))) (-29.20)