mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AATACTGCCGGGTAATGATGGA CGTCTTACCCAGCAGTGTTTG CCCTCGTCTTACCCAGCAGTGTTTGGGTGCGGTTGGGAGTCTCTAATACTGCCGGGTAATGATGGAGG 3 1 3' arm Macaca_mulatta mirbase mir-8 3e-31 hsa-mir-200c 4e-33 -31.3 ((..((((((((((.((((((((.(((.((........))))).)))))))).)))))).))))..)) (-31.30)