mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AAGTGCTGTCATTGCTGAGATC ACTCAGCCTCGGGGGCACTTTC TCTCACTCTGTGGCACTCAGCCTCGGGGGCACTTTCTGGTGTCAGAATGAAAGTGCTGTCATTGCTGAGATCCAATGACTGAGG 6 0 3' arm Macaca_mulatta mirbase mir-290 2e-36 mml-mir-512 2e-42 -33.8 .((((.((..(((..((((((...((.(((((((((............))))))))).))...))))))..)))..)).)))). (-33.80)