mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CAAAGCGCTTCTCTTTAGAGAGT TCTCTGGAGGGAAGCGCTTTCTGTT GCGAGAAGATTTCATGCTGTGACTCTCTGGAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAACAAAGCGCTTCTCTTTAGAGAGTTACGGTTTGAGAAAAGC 0 2 3' arm Macaca_mulatta mirbase mir-515 5e-43 hsa-mir-518c 2e-45 -53.4 .........(((((.(((((((((((((((((((((((((((..((((.((.....)).))))))))))))))))))))))))))))))).)))))..... (-53.40)