mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AATGCGCTTCCCTTTAGAGGG CTCTAGAGGGAAGCACTTTCT TCTCAGGCTGTGACCCTCTAGAGGGAAGCACTTTCTGTTGTCTGGAAGAAAAGAATGCGCTTCCCTTTAGAGGGTTACTCTCTGAGA 2 0 3' arm Macaca_mulatta mirbase mir-515 5e-43 hsa-mir-523 1e-27 -52.8 (((((((..((((((((((((((((((((.(.((((....((.....))..)))).).))))))))))))))))))))..))))))) (-52.80)