mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CTACAAAGGCAAGCACTTTCTC AAAGAAGGTGCTTCCCTTTGCAGTG TCATGCTGTGACCCTACAAAGGCAAGCACTTTCTCTTGTCTAAAAGAAAAGAAGGTGCTTCCCTTTGCAGTGTTACGGTTTGAGA 2 3 5' arm Macaca_mulatta mirbase mir-515 7e-42 ppy-mir-524 1e-33 -38.9 (((.((((((((.((.((((((.((((((((((((((......))))...)))))))))).)))))).)).)))))))).))).. (-38.90)