mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGGAGGCAGCGCTCTCAGGAC CTGGGCTCTGCTCCTCC CAGTGCTGGGATCTCAGGAGGCAGCGCTCTCAGGACTTCTCCACCATGGTCTGGGCTCTGCTCCTCCTCACCCTCCTCACTCAGGGCACAGGTGA 1 4 5' arm Macaca_mulatta mirbase mir-650 3e-26 mml-mir-650a-1 1e-46 -30.8 ..((((.(((.....(((((.(((.((((...(((((..........))))))))).)))))))).....))).(((.....)))))))...... (-30.80)