mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCACCATGACCCTGATCCCACT TGGGCCAGGGCCGCGGGGGGGA GTGGGCCAGGGCCGCGGGGGGGAGCAAGCCATCTAGCATTCCTGGGAAACGCTTACATCTCACCATGACCCTGATCCCACTAG 5 2 3' arm Macaca_mulatta mirbase 100 100 -31.4 (((((.(((((.((.((..((((..((((..(((((.....)))))....))))...)))).)).)).)))))..)))))... (-31.40)