mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGGATTGGGATCAGGTGCAGG GACCTGTCAGAGTTCATC CGGCGGGTGGATTTCGACCACAACGGCACCGTGGACCTGTCAGAGTTCATCACCACGTTGATGGATTGGGATCAGGTGCAGGCGGAGCAAGGTTGGCAGGTATATTTGGATC CCGGACCCAAACCCTGAGCGATGTCTGGAAGGCCATCTTGACTCAGGACGTCAACTGGAATGCGCTGGAGCTCAAGCAGCTGTCCCCCAGCGCCGTGGACCTGCTCAAGAGGTTGCTGCAGCGGGATCCCGCCCAACGGCCATCAGCATTCGTGGCTCTGGAGCACCCCTGGCTGTCGGAAGATGGCCGGGCGAGGGACCTGCCGCTGCAAGGCAGCGTTGTGCAGCGCCTGCAGCGCTTCTCGACCTTTGGCCACCTGAAGCAGCTGGTGCTGAAGATGATTGTTGACGAGATTCAAGATGAAGGCAAGCAGGGCAAGGCGCCTGCCAGCCGCAAGGCGCGCGCTGCTCTAGGGAACCTGCAGGACCTCTTCAACGAGCTCGACACGGACAGCAGCGGTGCAATAACGCTTGAGGAACTGTCAGCCGGGCTTCGGCGCCAGGGTTACGTCCTGGCTGACAATGAGATTGAGAACCTGATGCGGCGGGTGGATTTCGACCACAACGGCACCGTGGACCTGTCAGAGTTCATCACCACGTTGATGGATTGGGATCAGGTGCAGGCGGAGCAAGGTTGGCAGGTATATTTGGATCACGCATTCCGCAAGATGGATCACGACGGAGATGGCTACATCTCCTTGGACGAGCTCCTCCAGCAGCTGCCCCCGCTGCGGCCCGCGCCAGGTGTTGGCTCTCTGGCGCAGGTGGTTTCGGACGCAGCGGCTGCACTGGGCTTCAGCCGCGGGTACGACGGCGACGCGGAGCGCCTGGCGGAGGCCAAGTTAATGCTTCGTGAGGCGGACACTAATGGCGACGGGAAGATCAGCCGGGAGGAATTTTTCGATCTCTTGAAGGAGAGCCACGCGCCCGACAGTCTGTCTTTCTATGATGACAGACTGGCGATTACCACGGACGGTCGCACCTCGGCCGTGGTTGGGCAGCAGAACCGCCAGCCGGCCGCCAAGCTATGAAACATTTTTAAGCTTTATGTGAGCAAATAAGTATGTACTGGCAGCGGCATAGTATGCTATGGATGCTGCCGAAGCTGTGACATGTAACTGTTGGTTGTGCATCCCACTTATCGCCACCGATACCGACGGTGTTGGGGCTTTGGTATGTTCTGGCGCTACCTAACGCTGTCGAAGCGCTTGGCT 5 1 3' arm Volvox_carteri mirnest 100 100 -29.9 ...((((((.......(((.((((.((.(((((.(((((((..(((((((((......)))))))))..)).))))).)..)))).))...))))...))).)))))).... (-29.9)