mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCATATTCATCATCATCGTGC ACATCATGATAAACATGAAC CATGTGAATGTTCATATTCATCATCATCGTGCATCAGTCTCCCCATCCCCACAAACAGGTTTACATCATGATAAACATGAACAAGATGAT GCATGAGGCCTCGTGCCGAATTCGGCACGAGGCATCATCCTTCTCGTATGGACCATTGATTCACCCTTACAAGTGGTGGTGCGTGTTCAAGATGAATTACGTCCAGCACTCAATTATTCTGATTGTGATTCGGCACGTGCCACCAGCTATGTCTGGGCGAGTGTCGCCTACTCTGCTGTGTGCCTGTTAGCAGGCTGTATTCTCGCGTATCGTGTTCGTGCTGCATTCGAAATGTTTAATGATGCCAAATATATTGCCAACTCAGTCTATATCTTTACATTGACTGCCGTTGTCATTGCAGGGGTACAAGCTGGAATTAATACGGTTGGACAGATGCATGCTATTTTCTTTATCAGATCGATCGGAACATTGGTTGCATATGGAAGTTCTGTATCTCTCTTATTGATGCCACGTGTTGTTGGTGTTATGGCACATAGTGGTTCCGCAGCTACATATCAACCCACACAAATGGGCGCTCATCAACAACGAAGTGGTCACATGCATGATTCTACGGGTAGTGAACATCCTAAACAACAATCTGGATTAGGTAGTTTACCGGCGAAACAACCCCCTCATGTGAATGTTCATATTCATCATCATCGTGCATCAGTCTCCCCATCCCCACAAACAGGTTTACATCATGATAAACATGAACAAGATGATACTGTATTATTACCACCAGGATCCAGACGTGCATCAACTAGTCAAGTTTCGAAAACAACAGCACCACCAACGAATGCAACAACTCCAACAGGTGCATCCAGTATGGCTATGACTGTATCACCAGCAAGTGCTGCACAACCCAATGGGAAACCAAGACGTGCATTTCATTAAAT 4 1 5' arm Zingiber_officinale mirnest 100 100 -14.8 ........(((((((.((.(((((.((.(((.(((.((................)).))).))))).))))).)).)))))))....... (-14.8)