mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AAACAACAAGAAGAAGAAGAT CTTCTTCTTCTTCTTCTTCTT CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCGCTAAAGGTCATGGCCATGGTGATCATCACACAGATCTTTCTTTACATGTTTCTTGTTTTGCTTATTAAATGGTCTGCGGGTAAACAACAAGAAGAAGAAGATGACGAGATT CCCTCACACTTTTTTTTCAATCCCGGTTGCCGGGTTTCGGCCATTACGGCCGGGGGTCTCTCTCTCTCTCTCCTATTTAATCCAGTCTCCTATTCCATGCTCACTTCACATCACTGCTCATACCCACTACTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCGCTAAAGGTCATGGCCATGGTGATCATCACACAGATCTTTCTTTACATGTTTCTTGTTTTGCTTATTAAATGGTCTGCGGGTAAACAACAAGAAGAAGAAGATGACGAGATTTCATCACTTCCTGGGGAACCAAAAGTATCATTTCTACAGTTCTCTGGTTATATTACTGTCGACCGAGTTGCAGGCAGAGCTCTCTTTTACTGGCTCGCTGAAGACGTACATGCTCCCTTATCTAATCCTTTGGTTATTTGGCTTAATGGAGGACCAGGCTGCTCTTCTGTAGCATACGGTGCATCCGAGGAAATCGGCCCTTTCTTAATCAACAAGACTGCTTCCGGTTTAAAACTCATCAAGTTCTCATGGAGCTCTCTCGCCAACCTCCTTTTCCTCGAAACCCCCGCCGGCGTCGGCTTCTCCTACACCAACCGGTCCTCCGATTTGTTCGATACAGGCGACAACCGCACTGCTACAGATTCATTGCTGTTTCTGATCAGATGATTGGAAAGATTCCACGGCACAAGCAGCGAGAAGTGTACATCATCGGAGAAAGCTACTCCGGGCATTATGTGCCTCATCTGGCTAGGGAAATTATGATATATTATAAGAGATTAATCACCCCATTAATCTCCAGGGAATAATGGTTGGTAATGCAGTGACGGATGACTACTACTATGATCTCCGAACAGCGACGAATTGGTGGAGTCATGCTATGATGTCAGATGAAACTTATCGGCAGCTGATCATCACGTGTGATTTTATGAGGAGAAGAATCAAATGATGTGAGCACTGCATAGTATGCTATGATGATGAGTTGGTGAATAATTGATCATACAACATATATCACCTCCTTGCTAGCAAATTCTTATGA 4 0 3' arm Carica_papaya mirnest 100 tae-MIR1134 0.0005 -36.5 ....(((.((.(((((((((((((.((.((..((((((((.((((.((((.....((.((((........))))..))....))))..))))..((((.....)))).)))..)))))..)).)).))))))))))))).)).)))... (-36.5)