mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCATCATCATCATCATCCTCA ATGATCTTGATGAAGATGAAC AAGCCTCAGTCTACTAGGAGATCATCATCATCATCATCCTCATCGTCCATAGCTTCTTCTCATGTAATTCAGGGCTCTAATCAACTTTCTGGTGAAATCCCAGATCAGTCATTTGTCACAAATGGTATTGGTCAGATGGATTCTGCTGCGACACCAGATAATTCTTCCATATCAATAGGGGATGATGACTTTGATAGGAGCTCCCAGAAGAGTAAATCTGGTGGTGATGATCTTGATGAAGATGAACCTGGTGCCAAAAGATGGA CGGGGGCATGACGGGGATTCGGCCATTACGGCCGGGGGCAGAAACAAGTGAAAGGAAGTGAAAATCCAAGGAGTTATGCACGAGGCACATACCCAAATTGTCCAACCAAGAAGAAAGTTGAAAGGTCTTTAGATGGGCAGATTACTGAGATCGTTTATAAGGGTACCCATAACCATCCTAAGCCTCAGTCTACTAGGAGATCATCATCATCATCATCCTCATCGTCCATAGCTTCTTCTCATGTAATTCAGGGCTCTAATCAACTTTCTGGTGAAATCCCAGATCAGTCATTTGTCACAAATGGTATTGGTCAGATGGATTCTGCTGCGACACCAGATAATTCTTCCATATCAATAGGGGATGATGACTTTGATAGGAGCTCCCAGAAGAGTAAATCTGGTGGTGATGATCTTGATGAAGATGAACCTGGTGCCAAAAGATGGAAAATAGAAGGGGAAAATGAAGGAATTTCAGCTCCTGGGAGCAGAACTGTGAGGGAACCTAGAGTTGTGGTCCAAACAACCAGTGACATAGATATTCTAGATGATGGATACAGATGGAGGAAATATGGGCAGAAAGTAGTCAAGGGAAACCCAAATCCAAGGAGTTACTATAAGTGCACATACCCTGGTTTCCCTGTAAGAAAGCATGTTGAGAGGGCATCCCATGATCTTAGGGCAGTGATCACCACCTACGAGGGAAAACACAACCATGACGTCCCACCTGCTCGTGGCAGCGGAAGCCATTCTATTAATAGGCCACCATTTCCTGATAACAACAACAATAGCAATAGCAACAATGCAGCAATGATAATAAGGCCGATAGCTAATGTCACCGACAACTCTATAACTTATCCTCTCCGCAACTTAAGGCAGCAATCATCCGAAGGCAATCACCCTTAAGCCTAGACATGCTGCAGAGCTCTTGGGGAGTTCTCGGTTCTCGGGATTTCGGAAACC 4 0 5' arm Carica_papaya mirnest 100 100 -69.4 ...........(((((((...(((((.((((((..(((.((((((.(((....(((((((...........(((((((.(((((...(((((.......)))))..(((((((..((.....((((((.((..(((.....((((.((...)).))))....))).)))))))).....))..)))))))))))).)))))))..)))))))......))))))))).)))..)))))).))))).)))))))(((.....))). (-69.4)