mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ATTGCTTCATCATCATCGTCG GTGGTGGTGGTGGAGGCATCAT AAGGTCTGCCAATTGCTTCATCATCATCGTCGTCATCCCCATATTCCATTAGCTGGACTAAAGTATCCGGAACAGTTTCACATGGAGCTTTATTAACCACATTGTTGTCATGCACTTTCTGTGAGGATGATTGGAACTTTGGTGGTGGTGGTGGTGGTGGAGGCATCATTCTAGGAG CTCAAAAACTCAATAGTTAAACTCTATCAAGACCATCAGCAAACAATTTCTGGTTTCAATTTCCTGGAGGGAAGGATAATCGAGATACAATGTTGCAGAGTCTCTACGAGTCATCTTATATAGGGCACTAATTGCAGTCAGGTATTTACCAACTTGACGCAATACTATAGAACTCTATTTTTCCTCTTTTCCTCTGTTTGGATCCCTGGCCTCGTTTTTTTTTTTTTGTGGTGGTGTGGGGGGTACATAAATATTTCACAACCTGAACCACAGCCAACAAAAATCTACCAGCCAATTCCAGGTCAACTGAGAATGCCAAATCAGAGATGTGCAGTGGTCATTATTAAACAGCCCAGAATGGCTTTGGAGTTGCTAGCACACTTGAGCTACTTCTCAAAGGTCTGCCAATTGCTTCATCATCATCGTCGTCATCCCCATATTCCATTAGCTGGACTAAAGTATCCGGAACAGTTTCACATGGAGCTTTATTAACCACATTGTTGTCATGCACTTTCTGTGAGGATGATTGGAACTTTGGTGGTGGTGGTGGTGGTGGAGGCATCATTCTAGGAGGTGGCGGAGGCGGCATTGAACTGTACAATGGCTGAACCAACTTTTTCGGAGTCGTAGTACCAATTTTGCCTCTATCGCCTGCATCTGACATTCGTTCCTGAAGCATTGGAAGCTCTGGACTCTGCA 5 1 5' arm Capsicum_annuum mirnest 100 100 -43.3 ....(((......((((((((((((((((...(((((.(((((.((((.....)))).))((((.(((((..((.(((((((.((.((.....((((......))))....)).))...))))))).)).)))))))))))).))))))))))))))).))))))........))). (-43.3)