mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCATCTTCATCATCATCTTCC ACGATGATGATGAAGATGAAG CTTCAAGTTCTTCATCTTCATCATCATCTTCCATTGTTACCACTTCAAGAATATCATGTTTCAATGCGTGTAAACCAAAACCGATCAGTATTACCCCTTCCAAAGCTCGATTATTTCGCCACGAACGAACAACTCCAACCCCAACTGTGATTGCTTCAGGTGAACAACTGAAAACTGAGGAATTGAGTAAAGACGATGATGATGAAGATGAAGACGGTCCG TAAGCATATGCTCGTTTCTAAGCGTCATCTCCATATTCCCGCAAATTTCTTCATCTTCACCACCACCAATAAGAGAATATCCAGTCTCAAGATAAAATCACCTTCTCATTCCCCCAATTTAAACCCTCAATTCTCAAACTACTACACTCCCAATCCAATTTACCACCATGAATCACGCAAACATCTTCAATCTCTCCAAACCCATCAAATTCACTTCCATCTTCAAGTTCTTCATCTTCATCATCATCTTCCATTGTTACCACTTCAAGAATATCATGTTTCAATGCGTGTAAACCAAAACCGATCAGTATTACCCCTTCCAAAGCTCGATTATTTCGCCACGAACGAACAACTCCAACCCCAACTGTGATTGCTTCAGGTGAACAACTGAAAACTGAGGAATTGAGTAAAGACGATGATGATGAAGATGAAGACGGTCCGCCTTCACAGGTCGAATCAGAAGTGACTACTCAACCTAAGCGGATTGCTCTATACAACAAGACATCTCCCGTTGCATATGAATCAGGGCACGAAAATCAGATTCAGAGCTTCATTAAATACCTGCCCGACATGCGCGATGAGGCGATGGTAGTAACTACTCAAGAAGGGGTGCCTCAAGAACTACACGGAGCGCAATCGGCCGACTCACGAAGCTTCCCTAGACCAAGGTACGAATATGCGCCACGATCTCTGGCATTGAGCCCTAGAAGCAACAACGATGCGAGACAATTTAAGCACGACCTCATCCACAAAACATCTCCGGGTATCATGG 2 0 5' arm Centaurea_solstitialis mirnest 100 ath-MIR414 0.0002 -48.9 ........((((((((((((((((((((.((.....((((((.(((.......(((..(((((.((.((....)))).....(((((((.((.........)).))).))))..((((((..((((((.((................)).))).))).))))))....)))))..))).))).)).)))).)).))))))))))))))))))))....... (-48.9)