mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCATCGTCATCGTCATCATCA ATAATAACGATGGCCATGAAA GACATCAAAACGATAATAACGATGGCCATGAAAGCTCATCGTCATCGTCATCATCATCAAATGCTC GACATCAAAACGATAATAACGATGGCCATGAAAGCTCATCGTCATCGTCATCATCATCAAATGCTCCACCGGCTTTTAGACCCCACACAGGTGGTGATGTGCGATGGGAAGCCATCAATTCTGTTATTGCAAGAGATCGAGAAATCGGGCTCAGCCATTTCAAATTGTTGAAAAGACTTGGATATGGAGATATTGGAAGTGTGTATCTAGTGGAATTAAGAGGAACCAATACCTTCTTTGCAATGAAAGTTATGGACAAGGCTCCTTTAGCCAGTCGAAACAAGCTGCTTCGAGCCCAGACCGAAAGAGAGATTTTGGGTCTTCTCGATCACCCCTTCTTGCCAACTCTATATTCTTACTTTGAAACCGATAAGTTTTATTGCTTGGTTATGGAATTCTGTAGCGGAGGTAATCTCCATACTCTTAGACAAAAGCAACCCAACAAGCATTTTACCGAGGATGCAACCAGGTTCTTCGCGTCAGAAATACTATTGGCACTTGAATACCTGCACATGTTGGGGATCGTTTACAGGGATCTGAAGCCAGAAAACGTACTTGTTAGAGATGAGGGCCATATCATGCTTTCTGATTTTGACCCTTCACTCCGTTGTTCCGTCAACCCAACTCTCGTTAAGTCTTCATCGGTGCATAGCGGCAACCATAATGGTGCCCATAGCGGAGGCGGAGGTGGAGGAGGTGGCGGAGGAGGAGGTGGTATGGTGGACGATGACAATACGGTTGTACCAACTAGCAATCAAGCATCAAACTTTTTTCCAAGGATCTTGCCTAAGAAGAACCGCAAATCGAAATCAGATT 4 0 3' arm Centaurea_solstitialis mirnest mir-598 0.00001 ath-MIR414 0.0002 -17.4 ...........(((.((.((((((((.((((....)))).)))))))).)).)))........... (-17.4)