mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCATCATCATCATCATCATCA ATGATGTCTGGTGAGATGTTT AACTTTTCAAAATATGATGTCTGGTGAGATGTTTCCTATTCCTCTTCAAGATCATCATCATCATCATCATCAACACCATCAA ATAGGCGGGGAGCAATAAGCATCCAGAGAGAGATAGAGAGAGAAATATTCTGTTTAGAGAGGGTTTGAAAGTATTGGGGTTTTCTTGTTTTTGGTGTTTTGTTAGTGATAAAAACACCAAAAAAACACAACAATTTAGTTGTAAGTAAACTCCACCAGATCTCTCTTTCTGTCTGTAACAACAGTCTCTCCCTTTAGATTATTGTGGTTTTTGTTTGTTTTGGTTGATTTCAGCTTCTTCTTTCAGCTATCTTGTGCTTAAAAGTAAATTGTTTCTTACTTCTTTTTTGGCACAATCCTACATATACATCTCTTGGAAGTTTTGTTTTAATACATAAAACCAAACTCTTTTGTGTTTACTTAGCTTTGTTTTTGTTTTCTACTTTTGTATTTTCAAAGTCTTGTGGTTTGTTTTTGTAAGTAGTGTGCTTGCTAGCTAAACTACAAACAAAGCTTTCAATCTTAATCTTATAGCTGAAAAGGAAACAAATTAAACTTTTCAAAATATGATGTCTGGTGAGATGTTTCCTATTCCTCTTCAAGATCATCATCATCATCATCATCAACACCATCAACCATTACCACCTCATGAACCAAGCCCTAATCCTAAACCCCTCTCCAACCTCAAGAAGAAGAGAAATTTACCAGGCACCCCACATCCAGATGCTGAAGTTATGGCACTTTCACCGAGATCTCTGATGGCAACAAATCGATTTGTATGCGAAATCTGCAACAAAGGCTTCCAAAGAGACCAAGACCTGCCACTTCATAGAAGAGGTCACAATCTGCCATGGAAGCTG 4 2 3' arm Centaurea_solstitialis mirnest 100 100 -13.9 .............((((((..((((((((((..((..............)).)))).)))))).))))))............ (-13.9)