mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GAGACTGGGGTGGGGCC TCACCACCTCCAGTTTCTG AATAGATTATTGGTCACCACCTCCAGTTTCTGAATTTGTGAGACTGGGGTGGGGCCTGAGAATTTGC 0 2 3' arm Homo_sapiens mirbase mir-544 0.00001 100 -30.4 ..((((((...((((.(((((.((((((((.........)))))))))))))))))....)))))). (-30.40)