mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ACGTCATCATCATCATCTTCA AGGATCATGATATGATTCAT AAATGGAGTCGGAGGATCATGATATGATTCATAATAAAAATAAAGATAGGTTTTCGTCTTCAACGTCATCATCATCATCTTCACACTGTAAC CGGGGGATTCACTCTTTTCATTCCCACTAAACACAAACATAAATCCTTCATATTTATATAGAATCAGAGCTTCAATTCAAGATCATAAAGCAAGAATCCTTTTTTCAAAATTAGATCAAGAAATGGGGAGGCCTCCATGTTGTGATAAACTTGGTGTCAAGAAAGGTCCATGGACTCCTGAACAAGATATTATGCTTGCTTCATACATTCAGCAACATGGCCCCGGGAATTGGCGTCAAGTCCCAACCAACACCGGACTAAGAAGATGCAGTAAGAGTTGTAGGCTGCGATGGACGAATTATCTCAGGCCTGGAATCAGAAGGGGAGATTTCACAGATGATGAGGAGAAAATGACCATTCAGCTTCAGGCTCTTCTGGGCAACAAATGGGCGGCTATAGCTTCTTATCTTCCTGAAAGAACTGATAACGATATCAAGAATTACTGGAATACCCATTTGAAAAAGAAGCTCAAGAAGCTTGAAATGGAGTCGGAGGATCATGATATGATTCATAATAAAAATAAAGATAGGTTTTCGTCTTCAACGTCATCATCATCATCTTCACACTGTAACTCTAGAGGCCAATGGGAGAAGAGGCTTCAAACCGATATTCAGATGGCAAAACAAGCCTTAACCGATGCTTTGTCAATTGATCACAAACCGGTTTTTCTACCTCAAACAACTAAATCATCCTCTCATACGCCTGCATACCCTTCTAGCACTGATAACATAGCCAAATTACTCACAGGCTTCATGAAAAACTCCCCCAATAACGCCCAAACATGTTCAAATTCAAGTACTCGTGAATC 4 1 3' arm Cichorium_endivia mirnest mir-598 0.0003 100 -15.7 ......(((..((((((.((((((((((.....((.(((((........))))).)).......))))).))))).))))))..)))..... (-15.7)