mature_miRNA	miRNA*	pre-miRNA	EST_contig	mismatches	bulges	arm	species	source_database	RFAM_best_hit	RFAM_lowest_evalue	miRBase_best_hit	miRBase_lowest_evalue	folding_energy	secondary_structure
CCTCTTCCTCTTCCACTTCGA GGACACGGGGAGTGAAGAGGGA GTCGGGCATGTCGGACACGGGGAGTGAAGAGGGATCCTTAGCAACTGAAACAAACCAACATGGATCATCTCAAGATCCGGACACTGTTGCTGCTGCTGCTTCTTCTTCCTCTGCTGCTGCTGCTGCTGCAAAGAAGAGATCAACTAGGATTGTAACCAAGACAAAGCAGTACAGCAAAGCACAACCTCTTCCTCTTCCACTTCGAAATAAGAAC GAAGCTGAGCTCAGAGAGAAGAAAAAGGCAAAGAAAGAGAAGAAGTCGGGCATGTCGGACACGGGGAGTGAAGAGGGATCCTTAGCAACTGAAACAAACCAACATGGATCATCTCAAGATCCGGACACTGTTGCTGCTGCTGCTTCTTCTTCCTCTGCTGCTGCTGCTGCTGCAAAGAAGAGATCAACTAGGATTGTAACCAAGACAAAGCAGTACAGCAAAGCACAACCTCTTCCTCTTCCACTTCGAAATAAGAACAGGCGAAAGATGATCACTACTTGGATTTACTCCGTGTTAATAGCTTTGTCGGTGCTCGCTCTCTTCTTTGCTGGAAATTATATATCCTTTTCTTCCTTCAACACATCGCCAAACTTTGATATATAAAGTAATAAATTTCCATTTTTATAAGAACTAATGACATATATGGTTGTTTGGTTATAGAGAGAATAGGAAGGGGTGTTATAGAGAGTTTTAAAATGTTGATCATTCTTTGTGGACTGTTAAATGGGTTTTATCCCCAAGTTGGATCATCCTTTTTTTTTTCTTAAATATTTTAATTCTGGATGAATATTTATAGTTTGAAACCATCATTGTTTGACTGTTTAAGGTTTATTTTACTTGTGATGGTTT 3 1 3' arm Allium_cepa mirnest  100  100 -50.8 .((.......(((((...((((((.(((((((....(((((((((...............((((((.......))))))......))))))((((((((((((((((....(((.((.......)).)))))))))).(((......)))(((.......))).))))))..))).))).....)))))))))))))...))))).....)).. (-50.8)