mature_miRNA	miRNA*	pre-miRNA	EST_contig	mismatches	bulges	arm	species	source_database	RFAM_best_hit	RFAM_lowest_evalue	miRBase_best_hit	miRBase_lowest_evalue	folding_energy	secondary_structure
CCCTCCTTCGCCATCGCCATC TGGTGAAGTGAGTGGGGGT ACATTCTCGACCCCTCCTTCGCCATCGCCATCTCCACCGCCTCCACTAGCTACAGTGGACGAAGCGGCATCATGTAATGGCATCAATAAGCGTGGCTCATCAGCAATGGGCTCTGGGAAGCCTCCAAGAGCTGGTGAAGTGAGTGGGGGTCACGGCCA CCACGCGTCCGGGTATATGAAGAACATGAAGAAGAAGATGATGACTCTCTGCAGGGGATGGGGGACTTCCTTGGTGAGATGGCCCATATGATGAGCCAGACGCAGCCAGCGAGACAGGAAAGCTTTGAGGAGCTCCAGCAGCTCTTCGTGGACATGTTCCAGTCTGATATTGAATCGGGATTCTGCAACGGACCTGCCAAGGACCATGACCCAGTCCAAAGACAGACGCGAACATTCTCGACCCCTCCTTCGCCATCGCCATCTCCACCGCCTCCACTAGCTACAGTGGACGAAGCGGCATCATGTAATGGCATCAATAAGCGTGGCTCATCAGCAATGGGCTCTGGGAAGCCTCCAAGAGCTGGTGAAGTGAGTGGGGGTCACGGCCAGTCTGAGTTCTGTTTCGGGATGAGCGACGCCAAGCAAGCGCCGAAGGCGCGAGGCGGGAACGCTAGCAGGAGAAGGAACGGCCATAAGCAGAAACTGTCGTCGAAGCACGACGTCTCCTCCGGCGATGAGATGCCGAGACCACATGCAGCAGTATAGAGTAGCTTAACCCTCCGGTGTAACAATGCTGGTCCTTGGTGCCCTGCTGGCCGTGTCAAGGGTCGCTCCGTCACTCGGTAGTGCGGGCAGCGAGCAGGGCGTCGGCCGGGGTCGCCCGCCGGTAGGCCTGTAAGAGGATGTAGTAACGTGTAGTANAACACATCGGTTCATGCTATTGCTACCGCATTCTTTTCTCTCGGCTCGTGATGCCGTGTGTTGTACCGTGGCGTTGGACCTTCTAAATTCATGATACGGTGTTCATCGCTGTTGCAGTGAAAAAAAAA 3 2 5' arm Brachypodium_distachyon mirnest  100  100 -49.1 ........(((((((..(((((..((((((.(((..((((.((((((......))))))....)))).....((....(((.((......((.(((((((.....))))))).)).)).)))..)).))).)))))).))))).)))))))....... (-49.1)