mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CTGACTGTTGCCGTCCTCCAG GGGGGACGTTTGCCGGTCACTG GGGACGTTCTGGGCTCAGAGGGGGTGGGGGACGTTTGCCGGTCACTGCTGCTGGCGCCCTGACTGTTGCCGTCCTCCAGCCCCACTCAAAGGCATCC 2 5 3' arm Pan_troglodytes mirbase 100 ppy-mir-943 3e-41 -40.7 .(((.((((((....))))((((.(((((((((...((((((((..((.......))..))))))..))))))))))).))))........)).))) (-40.70)