mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGAGCCCCTGTGCCGCCCCCA GGGGGGAGAGGGACACGCCCTGGGCTCTGCCCAGGGTGCAGCCGGA GTGGGTACGGCCCAGTGGGGGGGAGAGGGACACGCCCTGGGCTCTGCCCAGGGTGCAGCCGGACTGACTGAGCCCCTGTGCCGCCCCCA 2 31 3' arm Pan_troglodytes mirbase mir-1225 1e-31 mml-mir-1225 6e-33 -49.7 .((((.....))))..((((((((.((((...((((((((((...))))))))))..(((((.....))).)))))).).)).))))). (-49.70)