mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AAAGTGCATCCTTTTAGAGTGT CCTCTACAGGGAAGCACTTTCT AGGCTGTGACCCTCTACAGGGAAGCACTTTCTGTTGTCTGAAAGAAAGGAAAGTGCATCCTTTTAGAGTGTGACTGTTTGAGA 3 0 3' arm Pongo_pygmaeus mirbase mir-515 1e-40 hsa-mir-519a-2 9e-35 -33.6 ((((.((.((.(((((.(((((.(((((((((....((.....))..))))))))).))))).))))).)).)).)))).... (-33.60)