mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGGAGGAGAAGGAAGGTGATG GTAGACAGCCCTTTTCAAGCCCT TTTAGGGGCTGATGAAAGTGGAGTTCAGTAGACAGCCCTTTTCAAGCCCTACAAGAAACTAGGGTTTCTGGAGGAGAAGGAAGGTGATGAAGGATCTGTTCTCGTGAGCCTGAA 10 2 3' arm Pongo_pygmaeus mirbase mir-765 6e-40 ptr-mir-765 6e-55 -36.2 .....(((((.((((.((..((.((((....((...(((((((((((((((........))))))))......)))))))...))..))))...))..)).)))).)))))... (-36.20)