mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGAGAATCTTGATGATGCATT TGCATACAACATTCTATAT GTGTTCTTTTAATGCATACAACATTCTATATCAGTTTTACCACTAACCAAGATCAATAAAGCCTTTTACCTGAACTGTTGAGAATCTTGATGATGCATTATTCCAGAA AGTTTCAACCCGCGTTACTTATCAATTGGGTTGATTTGATATTTTTTGTATACGTAACGGGTCACAGGACATGAACGGGTCAAAGGTCACCACAAAGTGTTCTTTTAATGCATACAACATTCTATATCAGTTTTACCACTAACCAAGATCAATAAAGCCTTTTACCTGAACTGTTGAGAATCTTGATGATGCATTATTCCAGAAGCTTCCTCTTCTGCACATATTTCTAAAGACGTGACCCTTCGATTCCGAGCCGCAGTAAGAAACACGTGGCTAATTCGCGCAAACGCGTTTTTTTCTTGGGTTTTTTCGCCAAACCGATAAGTGACGGTTCCAAACAAGAACATTATTAGGGCAAAACCCATCATAACACAAGGAATCCCAAAGCCAAGACCCCAACTAAGGTTATCTTGAATGTAACTAAGAACAAGGATCCCAACTGTAGCTCCTGCACACAATCCAAAATACCACCAGTTGAAGAATGAGCTTTTGGATTTGAGTTCTTCTGGATCATCTGCATCAAACTGGTCAGCCCCAAATGCCTCAACACATGGCTTGTGTCCACATTGGGCAAATGCCACTAGATACAAAGCAATGAAAAATATGACAACTTGGAGCTGAGGTGAACATGATGAGCCATCAATGGAGTTTGTACAGTCAGATGTAATCGATGTTGAAAAGCCAGCAATGCAAGTGCCAGGATATAGAGC 4 2 3' arm Helianthus_annuus mirnest 100 vvi-MIR172b 0.0003 -18.865 ...((((..((((((((.(((.(((((....((((((..................................))))))...))))).)))...))))))))....)))) (-18.865)