mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGATCTAGCCAAAGCCTGACTGT CAGTCAGGCTCCTGGCTAGATTCCAGG TTTTTACCAGTCAGGCTCCTGGCTAGATTCCAGGTACCAACTGGTACCTGATCTAGCCAAAGCCTGACTGTAAGCTGCAA 1 4 3' arm Mus_musculus mirbase mir-344 6e-39 rno-mir-344a-2 2e-38 -47.2 ..(((((.(((((((((..(((((((((..((((((((....))))))))))))))))).))))))))))))))...... (-47.20)