mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CTCTAGCCAGGACCTGACTAC AGTCAGTCTCCTGGCTGGAGTC CCAGTCAGTCTCCTGGCTGGAGTCCAGCTCTAAGCTGGTTCCAGGCTCTAGCCAGGACCTGACTACAA 3 1 3' arm Mus_musculus mirbase mir-344 7e-32 mmu-mir-344f 4e-33 -39.6 ..((((((..((((((((((((((((((.....)))))......))))))))))))).)))))).... (-39.60)