mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CAGGCTCTAGCCAGGGGCTTGA AGGCTCCTGGCAGGAGTCCTGCT TGCCAGTCAGGCTCCTGGCAGGAGTCCTGCTCTCAGCTGGTTCCAGGCTCTAGCCAGGGGCTTGACTGCAA 1 1 3' arm Mus_musculus mirbase mir-344 1e-33 mmu-mir-344g 7e-35 -44.4 (((.(((((((((((((((.((((.((((...((....))...)))))))).)))))))))))))))))). (-44.40)