mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGGTCTGTAGCTCAGTTGGCAGA GAGCAACAACAACAGCAACAACCCGAG CACTCGAGCAACAACAACAGCAACAACCCGAGAGCCTATCTAGGGCCTAGGTCTGTAGCTCAGTTGGCAGAGT 7 4 3' arm Mus_musculus mirbase tRNA 0.001 100 -23.8 .((((..((..((((...(((.(((..((.((.((((.....)))))).))..))).)))..)))))).)))) (-23.80)