mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAGCACCATCTGAAATCGGTTA ACTGATTTCTTTTGGTGTTCAGA ACCCCTTAGAGGATGACTGATTTCTTTTGGTGTTCAGAGTCAATAGAATTTTCTAGCACCATCTGAAATCGGTTATAATGATTGGGGA 3 1 3' arm Rattus_norvegicus mirbase mir-29 4e-22 mmu-mir-29a 7e-45 -35.14 .((((.......((((((((((((...(((((((.((((...........)))))))))))...)))))))))))).......)))). (-35.14)