mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GTGGATTTTCCTCTACGAT CATAGAAGGAGAATCTACCT GTGGTTTCCCAAGCAGCATTTGATACTGAAAACGTGGATTTTCCTCTACGATTAGTCATTAATATTGTACTCATAGAAGGAGAATCTACCTTTTAAATATCAAAGAACAACTCGATCCAG 2 1 5' arm Rattus_norvegicus mirbase mir-154 6e-28 rno-mir-376a 4e-41 -28.11 .(((..((..........(((((((...((((.(((((((((((((((.((...((((.......)).)))).))).)))))))))))).))))...))))))).........)).))). (-28.11)