mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTATCAGAATCTCCAGGGGTAC CCCCCAGGTGTGATTCTGATTTGC GGAGCTTATCAGAATCTCCAGGGGTACTTATAATTTGAAAAAGTCCCCCAGGTGTGATTCTGATTTGCTTC 5 2 5' arm Bos_taurus mirbase mir-361 8e-29 ssc-mir-361 7e-35 -31.3 (((((..(((((((((.((.((((.((((...........)))).)))).))...)))))))))..))))) (-31.30)