mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGTCTTGCAGGCCGTCATGCAGG GTCATGCAGGCCACACTGACGGAAACGTTGCAGGTCGTC CGTCCTGCGAGGTGTCTTGCAGGCCGTCATGCAGGCCACACTGACGGAAACGTTGCAGGTCGTCTTGCAGGGCGTCTCGCAAGACGACACA 11 16 5' arm Ovis_aries mirbase mir-431 3e-35 bta-mir-431 4e-43 -48.7 .((((((((((..(.(((((.((((........)))).....((((....))))))))).)..))))))))))(((((....)).)))... (-48.70)