mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCTGACCTTCCTGCATCCCGTTT ACGTGGATGCTGAAGGTCAGAGG ATGGGAGCCATCGCCCTGGGCCAGGTACGTGGATGCTGAAGGTCAGAGGGAAGTGCTTCTGTCTCCACGTGTGTTCTCCAGGCCTCTGACCTTCCTGCATCCCGTTTATCTCTAGGATGATGGCTAGAAG 3 2 3' arm Ovis_aries mirbase 100 oar-mir-3956 9e-70 -57.5 .....((((((((.((((((......(((.((((((.((((((((((((........((((....((....)).....))))))))))))))))..))))))))).....)))))).))))))))..... (-57.50)