mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGCTACATTGTCTGCTGGGTTT ACCTGGCATACAATGTAGATTTCTGT TGAACCTGGCATACAATGTAGATTTCTGTGTTTGTTGGGCAACAGCTACATTGTCTGCTGGGTTTCAGGC 3 4 3' arm Sus_scrofa mirbase mir-221 7e-26 eca-mir-221 7e-32 -28.6 .(((((..(((.(((((((((....(((((((.....))).))))))))))))).)))..)))))..... (-28.60)