mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAGCACCATTTGAAATCGGTTA ACTGATTTCCTTTGGTGCTTAGA TGAAGACCCTCATCTCTCTCTCTCTCTCCCCACCAAACGATGACTGATTTCCTTTGGTGCTTAGAGTCCCATCTGTCATCTAGCACCATTTGAAATCGGTTATAATGACTGGGGATCAATTCTTCA 3 1 3' arm Danio_rerio mirbase mir-29 4e-29 tni-mir-29a-2 0.00000000000003 -38.83 .(((((....................((((((.......((((((((((((...(((((((.((((.(......).).))))))))))...))))))))))))......)))))).....))))). (-38.83)