mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CTCGAGCCAGACAACATTCCT GAATGAAGCCTGGTCCGAGAA AAAGCAAAAGTTGGGTGGGGGGAATGAAGCCTGGTCCGAGAATCATTTTTTTGTGTAAGAGGGTAAATTTCCATTGGAAACTTTCACTGATCTCAGTACTCTACTCCTCCTCCTCCTCCATGACCTCGAGCCAGACAACATTCCTCTCAACCTCACCTTTGCA TTTTTTTTTTTTTTTTGTGCAGATCGAGAGAAAGATGAAAGGAAGAGAAAGCCTTACCATAAGGGCATGCGAGATATGAAAATGGAGAGAAAGAAATTTAAATTAAGGAAAAAGCAAAAGTTGGGTGGGGGGAATGAAGCCTGGTCCGAGAATCATTTTTTTGTGTAAGAGGGTAAATTTCCATTGGAAACTTTCACTGATCTCAGTACTCTACTCCTCCTCCTCCTCCATGACCTCGAGCCAGACAACATTCCTCTCAACCTCACCTTTGCAAGCTAGGAAGAAGAAGCATGTCAAGTTCTCAACCACACACAACACACATGATCTTGCCTCGTGCT 5 0 3' arm Glycine_max mirnest mir-166 0.00000000000004 gma-MIR166b 8e-77 -44.6 ...(((((.((.((((((((((((((....(((((.((((..((((............(((((((..(((((...))))).....((((....))))....))).))))..........)))).)))).)))))....)))))))))).)))).)).))))). (-44.6)