mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTGACAGAAGATAGAGAGCAC GCTCTCTAGTCTTCTGTCATCA ATCTCATGAGGAGGAGGTGTTGGTGATGCTGTTGACAGAAGATAGAGAGCACTGATGATGAAATGCATGAAAGGGAATGGCATCTCACTCCTTTGTGCTCTCTAGTCTTCTGTCATCATCCTTCTCCCTCCCCTCTCT ACGAGGCTTCCTCCTTTTCGACAAGCAAGAAAGGAAAATACCATATCTTCCCTCTCTCATCAGAAGTTTAAAACAAATCCTATTCTGAGCTTTCATCTTAAATTTGGTTTTCTCTGTCATCTTTTTTTTTTTTCATTCGTTTTAATTTGATGTTCTCTCATTCGTTTACATCAAAATCTCATGAGGAGGAGGTGTTGGTGATGCTGTTGACAGAAGATAGAGAGCACTGATGATGAAATGCATGAAAGGGAATGGCATCTCACTCCTTTGTGCTCTCTAGTCTTCTGTCATCATCCTTCTCCCTCCCCTCTCT 1 1 5' arm Glycine_max mirnest 100 gma-MIR156e 4e-66 -54.3 .......((((.(((((....((.((((....((((((((((((((((((((.((.(((((.((((.............)))).))).)).)).)))))))))).)))))))))).))))))....)))))))))... (-54.3)