mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGGACGGAGAACTGATAAGGG CTTATCACTTTTCCAGCCCAGC CGCTCACATCTCCTTATCACTTTTCCAGCCCAGCTATAGGTTTTGAATCCGTTGGACGGAGAACTGATAAGGG 3 1 3' arm Fugu_rubripes mirbase mir-184 7e-23 tni-mir-184 3e-31 -23.7 ...........((((((((.((((((.(.(((((....((........))))))).))))))).)))))))). (-23.70)